Fixed an issue with superperms where plugins define perms with

inheritance after the root perms

EssentialsGroupManager/src/Changelog.txt

@@ -23,4 +23,5 @@ v 1.1:
     - Fix for GM not checking inheritance for known superperms nodes.
     - Optimized getAllPlayersPermissions and fixed pushing unknown perms to superperms.
 v 1.2:
-	- Changed priority if Registered events to lowest.
+	- Changed priority of Registered events to lowest.
+	- Fixed an issue with superperms where plugins define perms with inheritance after the root perms

EssentialsGroupManager/src/org/anjocaido/groupmanager/Tasks/BukkitPermsUpdateTask.java

@@ -18,6 +18,7 @@ public class BukkitPermsUpdateTask implements Runnable {
 	public void run() {
 		// Signal loaded and update BukkitPermissions.
 		GroupManager.setLoaded(true);
+		GroupManager.BukkitPermissions.collectPermissions();
 		GroupManager.BukkitPermissions.updateAllPlayers();
 		
 		GroupManager.logger.info("Bukkit Permissions Updated!");

EssentialsGroupManager/src/org/anjocaido/groupmanager/permissions/BukkitPermissions.java

@@ -93,7 +93,7 @@ public class BukkitPermissions {
         manager.registerEvent(Event.Type.PLUGIN_DISABLE, serverListener, Event.Priority.Normal, plugin);
     }
 
-    private void collectPermissions() {
+    public void collectPermissions() {
         registeredPermissions.clear();
         for (Plugin bukkitPlugin : Bukkit.getServer().getPluginManager().getPlugins()) {
         	for(Permission permission : bukkitPlugin.getDescription().getPermissions())
@@ -134,8 +134,8 @@ public class BukkitPermissions {
         Boolean value;
         for (Permission permission : registeredPermissions) {
         	value = worldData.getPermissionsHandler().checkUserPermission(user, permission.getName());
-
-            attachment.setPermission(permission, value);
+        	if (value == true)
+        		attachment.setPermission(permission, value);
         }
         
         // Add any missing permissions for this player (non bukkit plugins)